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Species belonging to selected taxon:

Psetta maxima



ABOUT THIS RECORD

ID: MNEST009805
species: Psetta maxima
miRNA family: miR-516a
source: miRNEST

Taxonomy by NCBI:
Psetta maxima Psetta Scophthalmidae Pleuronectoidei Pleuronectiformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTTTCCTTGCAGAGAGTTAG

miRNA*
AATGATCTGCAGCATGGACAAT

mismatches: 4
bulges: 1

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pre-miRNA
AATATTTGCAACTAAAAGCAAACAGATAAGTTAATGATCTGCAGCATGGACAATGTAAATCATTTGTAAGCACAACATCTTGGTTAAGAAACAGTTATTG
ACATGTTGTGAAATGAGTTTCCTTGTTTCCTTGCAGAGAGTTAGATGAGAAGGTTGAAGCCACTCATGTCTGT


dot-bracket secondary structure
.....((((........))))(((((((..(((((..(((((((...((((((...((.((((((.....((((((((....(((((.((....)).)))
)))))))))))))))).))...))))))..)))))))..))))).((((..(((....))).)))))))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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